# Anagha S. > Software Engineer @ Satija Lab, NYGC Location: New York, New York, United States Profile: https://flows.cv/anaghas As a software engineer in the Satija Lab at the New York Genome Center (NYGC), I maintain and develop new features for Seurat and other software for single-cell genomics analysis. Throughout my experience, I've focused on contributing to software that enables the analysis and interpretation of complex, layered data. I'm motivated by the potential of open-source computational tools to support reproducible and scalable biomedical research workflows. Looking forward to connecting! ## Work Experience ### Software Engineer, Single Cell Genomics @ New York Genome Center Jan 2025 – Present | New York, New York, United States ### Computational Research Intern @ OHSU Knight Cancer Institute Jan 2024 – Jan 2024 | Portland, Oregon, United States Extended open-source agent-based modeling & simulation software in C++ to add capability for tracking cell lineages; designed data processing & analysis pipelines in Python for downstream analysis of simulations. ### Data Analyst (Student Worker) @ Oregon Health & Science University Jan 2024 – Jan 2024 Developed high-performance multiscreen workflow in Bash and Python to process large-scale genomic data in parallel; contributed extensively to open-source R package microshades; managed cloud-based software environments. ### Undergraduate Researcher @ University of Illinois at Urbana-Champaign, School of Information Sciences Jan 2023 – Jan 2023 Assisted in the development of semi-supervised machine learning models in Python to predict chemical reaction rate constants for applications in environmental chemistry. ### Bioinformatics Research Intern @ Oregon Health & Science University Jan 2023 – Jan 2023 | Portland, Oregon, United States (Summer 2022 & Summer 2023) Analyzed and benchmarked statistical models for bias correction in high-throughput next-generation sequencing data of low-biomass microbiomes to improve data accuracy and clinical interpretability. ### CS 124 Course Associate @ University of Illinois Urbana-Champaign Jan 2022 – Jan 2023 | Urbana-Champaign Area Led office hours and exam review for object-oriented programming in Kotlin & Java; contributed tutorials and course content to CS 124 and the public Learn CS Online platform. ### Bioinformatics Research Intern @ Oregon Health & Science University Jan 2022 – Jan 2022 | Portland, Oregon, United States ## Education ### Bachelor of Science - BS in Computer Science University of Illinois Urbana-Champaign ## Contact & Social - LinkedIn: https://linkedin.com/in/anashen - Portfolio: https://anashen.github.io/ --- Source: https://flows.cv/anaghas JSON Resume: https://flows.cv/anaghas/resume.json Last updated: 2026-04-13