South San Francisco, California, United States
* Collaborated with wet-lab scientists to implement powerful automation programs and microbiome simulation algorithms
* Communicated with informatics scientists and managers to architect data structures and access systems to facilitate downstream analysis
* Planned and conducted test experiments to bring new technologies, tools, and modules into production
* Familiarity working with large scale multi-omics datasets including shotgun-metagenomic sequencing, RNAseq, whole genome sequencing, and proteomics
* Designed, developed, optimized, and maintained highly-scalable cloud-based microservice batch processing system. Patent Pending
* Implemented cloud based monitoring solutions for cloud stack including microservices, databases, and user behavior
* Identified, assessed, and proactively patched security risks across cloud system components
* Documented network, servers, and microservices in architecture-as-code templates
* Monitored and maintained extensive CI/CD stack
* Created machine learning analysis platform stewarding data through curation, preprocessing, feature selection, model optimization and selection for biomarker identification in Uclerative Colitis datasets
* Architected multi-database ETL architecture that pooled public and private data sources. Modernized legacy databases into multi-tenant architecture.
* Support the development, curation, and expansion of RDS and graph databases of multi-omics data and associated metadata in a modular way
