# Daniel Vagie

> Scientific Software Engineer, Data Scientist

Location: Greater Boston, United States
Profile: https://flows.cv/danielvagie

I received my PhD in Physics in 2021 and started working in the industry as a Data Scientist. My experience includes causal inference modeling, machine learning, R /  python programming, version control systems, and working on pipelines to process clinical data and train models.

## Work Experience
### Senior Scientific Software Engineer @ Ganymede
Jan 2025 – Present

### Scientific Software Engineer @ Ganymede
Jan 2023 – Jan 2025

### Data Scientist @ Aitia
Jan 2023 – Jan 2023 | Somerville, Massachusetts, United States
• Built pipelines using R, Python, and DVC to process clinical genomic data, and build causal AI disease specific Digital Twins to increase software reusability
• Assembled Python packages to streamline the biological and literature search process to validate drug targets using
Git, GraphQL, requests, Beautiful Soup, unittest, and Pandas by processing thousands of genes automatically
• First authored abstract that validated 3 genes as causal predictors of survival in Multiple Myeloma patients using causal inference and survival analysis regression to reach company goal, and increase visibility at ASH conference
• Collaborated with multiple colleagues to standardize procedure to evaluate clinical data as part of stage 1 RnD and Precision Medicine collaborative process to take data from deliverable format to trained machine learning model

### Data Scientist @ Aitia
Jan 2021 – Jan 2023

### Graduate Teaching Assistant @ University of Oklahoma
Jan 2016 – Jan 2021


## Education
### Doctor of Philosophy - PhD in Physics
University of Oklahoma

### Master's degree in High Energy Physics
University of Oklahoma

### Bachelor of Science - BS in Physics
East Stroudsburg University of Pennsylvania


## Contact & Social
- LinkedIn: https://linkedin.com/in/daniel-vagie-2802561ab

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Source: https://flows.cv/danielvagie
JSON Resume: https://flows.cv/danielvagie/resume.json
Last updated: 2026-03-31