# Phoenix Logan

> Senior Software Engineer at Chan Zuckerberg Initiative

Location: Oakland, California, United States
Profile: https://flows.cv/phoenixlogan

## Work Experience
### Senior Software Engineer @ Chan Zuckerberg Initiative
Jan 2022 – Present

### Software Engineer @ Chan Zuckerberg Initiative
Jan 2021 – Present | Mountain View, California, United States

### Software Engineer @ Chan Zuckerberg Biohub
Jan 2018 – Jan 2021 | San Francisco Bay Area
- Web development experience using Python, React, SQL, and Node.
- Cloud development experience, including AWS RDS PostgreSQL Database deployment and migration, Elastic Beanstalk app deployment, Batch, Lambda, EC2, etc. 
- Built out scalable, portable bioinformatic pipelines using nextflow. 
- Single cell sequencing analyses using kmer based methods. 
- Image processing for nucleus segmentation. 
- Tool building including building GUIs for machine interfaces, and histology H&E stain processing and annotation. 
- Rust development experience for demuxing sequencing applications.
- Raspberry Pi/ Microcomputer development experience, including building a prototype 96 well plate scanner using image processing with OpenCV.

### Sr. Advanced Analytics Developer @ Gap Inc.
Jan 2018 – Jan 2018 | San Francisco Bay Area
- Developed clustering model with python sklearn for retail data to predict popular style and size models for new store locations.  
- Created Interactive Dashboards using Flask and Plotly Dash to help end users interact with live data. 
-  Used Python unittest framework to test optimization model inputs and outputs to verify data integrity and minimize edge case interference
- Deployed Applications with Docker and Domino Data Lab Containers.
- Lead Development of Data Pipelines which included using Apache Airflow for monitoring pipeline progress, Celery for asynchronous tasks, and Rabbit MQ for messaging.

### Computational Biology Software Engineer @ Celgene
Jan 2017 – Jan 2018 | San Francisco Bay Area
Lead development of a single cell sequencing data visualization portal for bench scientists to interactively view and save data and visualizations. Progressing research and discovery by allowing scientists to easily sift through large amounts of data, likewise giving scientists a platform to actively collaborate and share data and visualizations. 

Developed interactive visualizations for bench scientists involving dimensionality reduction and principal component analysis in aid to characterize cancerous cell drug resistance. 

Front end and back end development experience using AWS, PostgreSQL, Django, Celery, Javascript, HTML, CSS, Docker. 

Gained presentation experience and lead live demos.

### Medical Informaticist @ Blue Shield of California
Jan 2016 – Jan 2017 | San Francisco Bay Area
Python/SQL development for trend reporting and analytics relating to health care utilization.
Production code development with Python and shell scripting.
Development with Python, SQL, and Tableau for Data visualization and dashboard creation for utilization records.
Data table maintenance

### Application Developer @ Blue Shield of California
Jan 2016 – Jan 2016 | San Francisco Bay Area
Developed unit tests for Blue Shield of California claims database.
Helped create new claims data model with Python and SQL for Blue Shield of California Healthcare Analytics team. 
Gained experience with data analysis, and healthcare data at the terabyte level.
Gave presentation to Blue Shield Informatics Department on GitLab for software collaboration.

### Developer Computational Chemist @ Wisconsin Institute of Medical Research (WIMR)
Jan 2015 – Jan 2015
• Utilized High Throughput Computing to analyze small molecule interactions with proteins to validate drug targets.
• Performed Linux shell scripting and python coding to formulate more specific screening of small molecules.
• Analyzed complex data relating to molecular thermodynamics
• Gained experience with molecular docking programs such as Vina, and with molecular modeling programs like pymol, and ADT (Auto Dock Tools).
• R Programming and Statistical Analysis.
•Gained experience with large datasets/databases.

### Teaching Assistant/Peer Leader @ University of Wisconsin-Madison
Jan 2014 – Jan 2014
• Evaluated weekly lesson plans and co-taught class once a week on new biological themes.
• Met with students, set up review sessions, and creatively implemented ways to increase understanding of biological concepts.
• Created presentations for effective studying, and finding undergraduate research opportunities at UW Madison.

### Recreational Sports Group X Instructor @ University of Wisconsin-Madison
Jan 2011 – Jan 2013
• Was in charge of creating spin workouts for the UW Madison community. 
• Created a fun workout environment for all levels of fitness.
• Attended monthly trainings/workshops
• Interacted with the public in a respectful and professional manner.

### Cal-Camps and Youth Programs Swim Instructor @ UC Berkeley
Jan 2012 – Jan 2012 | Berkeley CA
• Created lesson plans for beginning to advanced swimmers.
• Created a positive and encouraging environment for beginning/young swimmers.


## Education
### Bachelor of Science (BS)
University of Wisconsin-Madison


## Contact & Social
- LinkedIn: https://linkedin.com/in/phoenixlogan

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Source: https://flows.cv/phoenixlogan
JSON Resume: https://flows.cv/phoenixlogan/resume.json
Last updated: 2026-04-11